HARNESS Software Catalog

10 Item(s)

  1. AutoPtx
    AutoPtx is a set of simple scripts and robust mask images to run FSL probabilistic tractography in an unsupervised manner.
  2. CHeBA NiL Software (CNS)
    CHeBA NiL Software (CNS) is a software package for processing neuroimaging data.
  3. DCE-MRI processing
    Matlab functions for fitting DCE-MRI signal data to the Patlak pharmacokinetic model.
  4. FSL-BIANCA
    BIANCA (Brain Intensity AbNormality Classification Algorithm): FSL tool for automated segmentation of white matter hyperintensities
  5. PSMD - Peak width of skeletonized mean diffusivity
    PSMD (peak width of skeletonized mean diffusivity) is a robust, fully-automated and easy-to-implement marker for cerebral small vessel disease based on DTI, white matter tract skeletonization and histogram analysis.
  6. RegLSM
    The image Registraction tool for Lesion Symptom Mapping. This tool is jointly developed by the University Medical Center Utrecht and the Chinese University of Hong Kong.
  7. T1, T2 and T2* mapping
    Generate T1, T2 and T2* maps.
  8. The Utrecht Microbleed Detection App
    The Microbleed Detection App of the UMC Utrecht, the Netherlands. A semi-automatic workflow: fully automatic microbleed detection with visual confirmation.
  9. VAMPIRE
    Vascular Assessment and Measurement Platform for Images of the REtina
  10. White matter lesion segmentation by k nearest neighbor classification with tissue type priors (kNN-TTP)
    k Nearest Neighbor classification with tissue type priors is used to segment white matter hyperintensities on brain MRI.

10 Item(s)